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This is an old revision of this page, as edited by Zephyris (talk | contribs) at 07:57, 23 August 2006 (→Articles of Interest). The present address (URL) is a permanent link to this revision, which may differ significantly from the current revision.

Warning: This page is still under construction, and the templates featured on it subject to change. If you are interested in taking part in this project, please add your name to the participants list below.

The Metabolic Pathways Wikiproject aims to, through the use of well designed templates, make the articles in Wikipedia relating to metabolism easily navigable. This includes all relevant enzyme and biological chemicals!

Parent wikiproject: Wikipedia:WikiProject Molecular and Cellular Biology

Articles of Interest

This WikiProject is interested in all metabolism related articles, from metabolism to individual compounds and enzymes such as Glucose-6-phosphate, Adolase and Hexokinase.

Relevant articles can be tagged with the templates provided below.

Pathway of the month: Glycolysis

Method of Action

This wikiproject will target metabolic pathways one by one, with the intent of organising the parent article and creating an article for each compound and enzyme within the pathway. There is, of course, no reason why you can't work on any other pathways if you want!

To make the many relevant articles navigable the templates provided below should be widely used, effectively making diagrams containing links. See Glucose for an example of this in action. Templates should also be created to make link-containing diagrams of the overall pathway for relevent pages.

Information and References

All information used should be checked and referenced from an appropriate source. I recomend the KEGG pathway database at http://www.genome.jp/kegg/pathway.html. This is also easily refered to via the enzyme/compund/reaction code.

Resources

Templates

Enzymatic Reaction

Current status: Use. Complete and ready for use.

{{Enzymatic reaction
|foward_enzyme=
|reverse_enzyme=
|substrate=
|product=
|reaction_direction_(foward/reversible/reverse)=
|minor_foward_substrate(s)=
|minor_foward_product(s)=
|minor_reverse_substrate(s)=
|minor_reverse_product(s)=
|substrate_image=
|product_image=
}}

Gives, for example:

Glucose {{{forward_enzyme}}} Glucose-6-phosphate
File:Glucose wpmp.png   File:Glucose-6-phosphate wpmp.png
{{{minor_forward_substrate(s)}}} {{{minor_forward_product(s)}}}
[[image:Biochem_reaction_arrow_{{{reaction_direction_(forward/reversible/reverse)}}}_NNNN_horiz_med.svg|75px]]
 
 


Biochemical Reaction

Current status: Use. Complete and ready for use.

{{Biochemical Reaction
|reaction_A_major_substrate=
|reaction_A_major_substrate_image=
|reaction_A_foward_enzyme=
|reaction_A_reverse_enzyme=
|reaction_A_reaction_direction_(foward/reversible/reverse)=
|reaction_A_minor_reverse_product(s)=
|reaction_A_minor_reverse_substrate(s)=
|reaction_A_minor_foward_substrate(s)=
|reaction_A_minor_foward_product(s)=
|reaction_A_major_product=
|reaction_A_major_product_image=
|reaction_B_foward_enzyme=
|reaction_B_reverse_enzyme=
|reaction_B_reaction_direction_(foward/reversible/reverse)=
|reaction_B_minor_foward_substrate(s)=
|reaction_B_minor_foward_product(s)=
|reaction_B_minor_reverse_product(s)=
|reaction_B_minor_reverse_substrate(s)=
|reaction_B_major_product=
|reaction_B_major_product_image=
}}

Gives, for example:

Template:Biochemical Reaction

Complex Enzymatic Reaction

Current status: Use. Complete and ready for use.

{{ Complex Enzymatic Reaction
|major_substrate_1=
|major_substrate_1_stoichiometric_constant=
|major_substrate_1_image=
|major_substrate_2=
|major_substrate_2_stoichiometric_constant=
|major_substrate_2_image=
|major_product_1=
|major_product_1_stoichiometric_constant=
|major_product_1_image=
|major_product_2=
|major_product_2_stoichiometric_constant=
|major_product_2_image=
|foward_enzyme=
|reverse_enzyme=
|reaction_direction_(foward/reversible/reverse)=
|minor_foward_substrate(s)=
|minor_foward_product(s)=
|minor_reverse_product(s)=
|minor_reverse_substrate(s)=
}}

Gives, for example:

A B {{{forward_enzyme}}} C D
NA + NB NC + ND
{{{minor_forward_substrate(s)}}} {{{minor_forward_product(s)}}}
[[image:Biochem_reaction_arrow_{{{reaction_direction_(forward/reversible/reverse)}}}_NNYY_horiz_med.svg]]
I J
F

Complex Biochemical Reaction

Current status: Use. Complete and ready for use.

{{ Complex biochemical reaction
|reaction_A_major_substrate_1=
|reaction_A_major_substrate_1_image=
|reaction_A_major_substrate_1_stoichiometric_constant=
|reaction_A_major_substrate_2=
|reaction_A_major_substrate_2_image=
|reaction_A_major_substrate_2_stoichiometric_constant=
|reaction_A_foward_enzyme=
|reaction_A_reverse_enzyme=
|reaction_A_reaction_direction_(foward/reversible/reverse)=
|reaction_A_minor_reverse_product(s)=
|reaction_A_minor_reverse_substrate(s)=
|reaction_A_minor_foward_substrate(s)=
|reaction_A_minor_foward_product(s)=
|reaction_A_major_product_1=
|reaction_A_major_product_1_image=
|reaction_A_major_product_1_stoichiometric_constant=
|reaction_A_major_product_2=
|reaction_A_major_product_2_image=
|reaction_A_major_product_2_stoichiometric_constant=
|reaction_B_foward_enzyme=
|reaction_B_reverse_enzyme=
|reaction_B_reaction_direction_(foward/reversible/reverse)=
|reaction_B_minor_foward_substrate(s)=
|reaction_B_minor_foward_product(s)=
|reaction_B_minor_reverse_product(s)=
|reaction_B_minor_reverse_substrate(s)=
|reaction_B_major_product_1=
|reaction_B_major_product_1_image=
|reaction_B_major_product_1_stoichiometric_constant=
|reaction_B_major_product_2=
|reaction_B_major_product_2_image=
|reaction_B_major_product_2_stoichiometric_constant=
}}

Gives, for example:

Template:Complex biochemical reaction



References

{{KEGG enzyme|2.7.1.69}}

Enzyme 2.7.1.69 at KEGG Pathway Database.

{{KEGG compound|C00668}}

Compound C00668 at KEGG Pathway Database.

{{KEGG reaction|R00959}

Reaction R00959 at KEGG Pathway Database.

Common Minor Substrates/Products

H2O

H<sub>2</sub>O

CO2

CO<sub>2</sub>

Inorganic Phosphate: Pi

P<sub>i</sub>

ATP

ADP

CoA

Article Tags

Stub Tag

Current status: Use. Complete and ready for use.

{{Metabolic pathway stub}}

Template:Metabolic pathway stub

{{Metabolic pathway stub|enzyme}}

Template:Metabolic pathway stub

{{Metabolic pathway stub|chemical}}

Template:Metabolic pathway stub

Article of Interest

Current status: Use. Complete and ready for use.

{{Metabolic pathway}}

Template:Metabolic pathway

User Tags

{{Wikipedia:Wikiproject Metabolic Pathways/Userbox}}

This user contributes to the Metabolic Pathways task force

Participants

Alphabetically, please

Name Talk page Special interests
Zephyris Talk General
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