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User:Yates9/chem basic

From Wikipedia, the free encyclopedia

Basic Chemistry Functional Groups

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Learning Neuroscience

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Creating a Wikibook Notes
Books for experts
background chemistry
Periodic_table
Atomic_orbital
Chemistry Homomeric
Moiety_(chemistry)
Phosphodiester_bond
Phosphodiesterase
Peptide_bond
biochemical/chemical mechanisms
Phosphorylation the addition of a phosphate (PO4) group to a protein or other organic molecule. Phosphorylation activates or deactivates many protein enzymes, causing or preventing the mechanisms of diseases such as cancer and diabetes.
Palmitoylation the covalent attachment of fatty acids, such as palmitic acid, to cysteine residues of membrane proteins
Myristoylation an irreversible, co-translational (during translation) protein modification found in animals, plants, fungi and viruses. In this protein modification a myristoyl group (derived from myristic acid) is covalently attached via an amide bond to the alpha-amino group of an N-terminal amino acid of a nascent polypeptide.
Glycosylation the enzymatic process that links saccharides to produce glycans, attached to organic molecules/proteins; produces one of the fundamental biopolymers found in cells (along with DNA, RNA, and proteins). Glycosylation is a form of co-translational and post-translational modification.
Acetylation a reaction that introduces an acetyl functional group into an chemical compound
substances
N-Ethylmaleimide
Maleimide
Methionine an α-amino acid with the chemical formula HO2CCH(NH2)CH2CH2SCH3. This essential amino acid is classified as nonpolar
background chemistry functional groups
Functional group
Alkane: CnH2n+2 only C + H (def: hydrocarbons),w/only single bonds (def: saturated) w/o cyclic structure
Alkyl: CnH2n+1 alkane missing one H, typically a part of a larger molecule
Alkene: RRC=CRR containing at least one C-to-C double bond
Alkyne: R-C≡C-R hydrocarbons with a triple bond between two C
Alcohol: R—OH a hydroxyl functional group (-OH) bound to C, usually connected to other C or H
Aldehyde: R-C(=O)H a carbonyl center bonded to hydrogen and an R group
Amide: R—C(=O)N–RR containing an acyl group (R-C=O) linked to a N atom
Amine: R—NH2 contain a basic N atom with a lone pair - derivatives of ammonia
Aromatic: unexpectedly stable ring structure
Carboxylic acid: R-COOH a carbonyl + a hydroxyl, -C(=O)OH, usually -COOH or -CO2H
Ester: R-C(=O)-O-R' a general term for the product derived from the condensation of an oxo acid and an alcohol
Oxoacid: an acid that contains oxygen
Ketone: RC(=O)R' a carbonyl group (C=O) bonded to two other carbon atoms
Nitrile: R-C≡N -CN group is also called cyanide group, (see cyano- prefix)
Nitro: R-NO2 most common explosophores used globally
Thiol: R-SH as S analogue of an alcohol group (-OH), can be named sulfhydryl group
Thioester: R-C(=O)SR' product of esterification between a carboxylic acid and a thiol
Acyl: RCO where R represents an alkyl group that is attached to the CO group with a single bond. derived by the removal of one or more hydroxyl groups from an oxoacid
Acyl chloride: R-C(=O)-Cl considered to be reactive derivatives of carboxylic acids
Fatty acid: a carboxylic acid with a long unbranched aliphatic tail
Ethyl_group: R-C2H5 an alkyl functional group derived from ethane (C2H6) often abbreviated -Et
Purine: a heterocyclic aromatic organic compound, consisting of a pyrimidine ring fused to an imidazole